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Data Monitor
Data Monitor (formerly known as Data Search) focuses on research data (as opposed to a web search engine or a document search engine) and is constantly optimized based on the recent updates and number of hits. We search for key phrases in the content of every data file in our repository rather than just the metadata index.
We have a Push API; which allows any repository to push data to the Data Monitor corpus and therefore appear in Data Monitor search results. For the Data Monitor API refer to the documentation and select Push API in the dropdown. We provide a preview of the data file contents in line (highlighting the search term), without needing to download the file, so that you can quickly evaluate which files are going to be useful for you.
We index thousands of data repositories either directly or via DataCite. Our complete list of indexed repositories can be provided upon request, or accessed via our API at https://datasearch.elsevier.com/api/docs.
In order to access Data Monitor you must have access via your institution. This can be either by:
- Logging in via institutional authentication (e.g. Shibboleth). This is the preferred method of access, to ensure reliable access to institutional features.
- Accessing from your institution's IP range
- Logging in with an institutional email address
Besides datasets that already have affiliation IDs, we identify related publications via Scholix.org, and then the authors and their Institutional affiliations via Scopus for all remaining datasets in our corpus. To learn more about which repositories we index refer to Which data repositories are indexed in Data Monitor?. To learn about how we use Institutional IDs for matching visit Which Institutional IDs do you use for matching, and how can I check or change them?.
We use a combination of the SciVal Institutional ID, Scopus Affiliation IDs and Mendeley Institutional IDs. The list of IDs has been shared and confirmed with your institutional representative, so please reach out to them or your customer consultant for more information. For more details on attribution of a dataset institution refer to How are datasets attributed to my Institution?.
You can correct the wrong institutional affiliation of the datasets using the “Exclude” option in Data Monitor. Please select dataset(s) wrongly attributed to your institution and then click “Exclude” link in the top menu. For a detailed description read the help article How do I Monitor my institution's Data?. Please note that it will take ~24 hours for exclusions to be processed. You can view all your requests for exclusion. To switch the view, please use the dropdown menu in the top left corner and then select Pending exclusions.
Most content on Data Monitor is updated daily, including updates of the repositories that we index directly, and repositories indexed via DataCite. Most enrichments are updated daily. Some others that use static data such as Scholix are updated every six months.
We do our best to represent the original datasets in Data Monitor. In cases where you find a potential error in one of the metadata fields, we advise that you first check the original dataset and if corrections are needed submit your request to the repository where the dataset is hosted. If the original dataset is correct, please notify us via your customer consultant and we'll correct the error if we can.
We display the number of citations following DataCite recommendations on Data Citation Display. This ensures consistency in displaying data citations for datasets across the repositories we index.
Learn more about which repositories we index by referring to Which data repositories are indexed in Data Monitor?
The integration without the API key gives you access to the source records (i.e. source metadata). The integration with the API key gives you access to the source records, the clean up of duplicates and metadata enrichments. Crucially, the metadata enrichment includes institutional and author affiliation, which makes it possible to match many more datasets to your institution.
The institutional API key has been shared with your institutional representative. For more information please reach out to them.
Will the datasets coming through the Data Monitor integration be ingested directly in my Pure instance?
The Data Monitor settings page in Pure gives you the possibility to set criteria for auto-import. Those datasets matching the criteria for auto-import will be automatically ingested. Otherwise, they will be presented as import candidates.What is the query logic implemented, when I enter both an institution name and an institution ID in the Data Monitor settings page in Pure?
For Pure 5.17.2 (or above) the query logic is: [institution name] OR [institution ID]; For Pure 5.16.3 - 5.17.1 the query logic is: [institution name] AND [institution ID];If I have no datasets in my Pure instance, which datasets will be provided through the Data Monitor integration?
The Data Monitor integration will present datasets that match the criteria you entered in the settings page, e.g. matching your institution name or ID.What happens if I already have some datasets in my Pure instance, will the Data Monitor integration present the same datasets as candidates again?
No, datasets that are already imported (or that were rejected) will not be presented as candidates again.If I don't have Pure, can I still integrate with Data Monitor?
Yes. You can use either the Data Monitor API or export records in a CSV format to integrate with your CRIS or any other institutional system. Please note: to be able to use the enriched Data Monitor content you'll have to apply your institutional API key.When doing an advanced search in Digital Commons Data use the following information regarding syntax for different ways to search for data. Data Monitor is a corpus that is currently served through Digital Commons Data.
Searching within fields
Use the following syntax to target one or more specific fields within a dataset by entering the desired field code and then placing the name in parenthesis following it. Note that the syntax field codes must be capitalized as below. For example, when searching by Author, type “AUTHOR(Jane Smith)”.- AUTHOR()
- AUTHOR_ID()
- GRANT()
- GRANT_ID()
- FUNDER()
- FUNDER_ID()
- INSTITUTION()
- INSTITUTION_ID()
- TITLE()
- ID()
- DOI()
- SOURCE()
- IS_SUPPLEMENT_TO()
- DATA_TYPE()
- RELATION_TYPE()
- PUBLICATION_YEAR()
- IMPORTED_DATE_GT()
- IMPORTED_DATE_GREATER_THAN()
- UPDATED_DATE_GT()
- UPDATED_DATE_GREATER_THAN()
- AUTHOR_ID() supports the following IDs: Mendeley User ID, Scopus User ID, ORCID and all user IDs supported by DataCite.
- INSTITUTION_ID() supports the following IDs: Scopus Institution ID, Scival Institution ID, Mendeley Institution ID.
- DATA_TYPE values must match (case sensitive) exactly one of the following:
- AUDIO
- CHEMICAL_STRUCTURES
- COLLECTION
- DATASET
- DOCUMENT
- EVENT
- FILE_SET
- GEO_DATA
- IMAGE
- INTERACTIVE_RESOURCE
- MODEL
- OTHER
- PHYSICAL_OBJECT
- SEQUENCING_DATA
- SLIDES
- SOFTWARE_CODE
- TABULAR_DATA
- TEXT
- VIDEO
- WORKFLOW
- SOURCE() values must be an exact match (case sensitive). A list of Source IDs indexed by Data Monitor can be found here.
Boolean Search Terms
Additionally, DataSearch supports Boolean search terms. You may search for data on Data Monitor using AND, OR or NOT query terms. Field codes can also be used in any boolean query, which includes OR between normal and field code queries. Currently Data Monitor can process queries like these:- chip-seq drosophila AUTHOR(Doe)
- chip-seq drosophila AUTHOR(Doe OR Hari)
- chip-seq drosophila AUTHOR(Hari) AND INSTITUTION(University of Manchester)
- chip-seq AND (drosophila OR “fruit fly”) AND ID(GEO4667)
- (chip-seq drosophila AND AUTHOR(Doe)) OR AUTHOR(Doe AND Hari)
- IS_SUPPLEMENT_TO(10.1016/j.dib.2015.10.003)
- SOURCE(MENDELEY_DATA)
- DATA_TYPE(IMAGE AND DATASET)
- PUBLICATION_YEAR(2019 OR 2020 OR 2021)
- FIELD CODE(“abcdfg”)
- FIELD CODE({abcdfg})
- Using a Field Code (without any modifiers): AUTHOR(John OR Martha)
- Splitting the operands into separate Field Codes with modifiers: AUTHOR({John}) OR AUTHOR({Martha})
- Using double quotes in a field code modifier. This is accepted in order to provide backwards compatibility to very common queries that might have been used extensively: INSTITUTION(“University of Manchester” OR “University of Oxford”)
It should be noted that using the “xxxx” construct (i.e. using double quotes to specify an exact text match in a search) is also allowed outside a Field Code. The behavior for such a query is expected. All words inside the double quotes are searched as they appear.
Alternatively, the {xxxx} construct ((i.e. using curly braces to specify an exact text match in a search) is only accepted as a Field Code modifier and is not accepted in a free text search (as curly braces are not accepted characters for free text search).
To conclude, here are some simple examples:
- AUTHOR(“John Doe”) - will search for authors whose names have exactly the words John followed by Doe in any part of their names.
- DOI({123456:1132/121(56)789}) - will search for the document that has a 123456:1132/121(56)789 DOI identifier.
- ID(“1234.1224”) - will search for the document that has a 1234.1224 external identifier.
- AUTHOR({John Doe OR Martha Hari}) - will search for authors whose names are John Doe OR Martha Hari in any part of their names (probably not finding anything).
- AUTHOR({John Doe}) OR AUTHOR(“Martha Hari”) - will search for authors whose names have either the sequence John Doe or Martha Hari in any part of their names.
- DATA_TYPE(*) AND PUBLICATION_YEAR(2008)
To begin, go to Mendeley Data and click Sign In in the top right section of the page. Upon logging in, the Mendeley Data homepage appears. Click Find Research Data. The Search page displays.
Note: While it is possible to perform a search without doing so, logging into Mendeley Data provides more metadata content. Data Monitor is a corpus that is currently served through Mendeley Data.
Enter keywords into the Search field, then click the Search icon (magnifying glass) or click Enter. To filter results, tick the desired checkboxes in the left column. You can filter by Data Type, Source Type, and Source. The number displayed behind each filter type indicates the number of results for that type.
Note: While you are able to make multiple selections from the Data Type option, you may only make one selection from the Source Type and Source options.
Search results appear in the right panel, and each results line item displays basic information such as Contributors, Date, Source, and more.
To view more detailed information, click the title of one of the results line items to expand it, where you will see in the left column under Details, one or more files associated with it.
Enabled by deep indexing, clicking on a file allows you to quickly preview its contents without having to open it. Also, you can verify that keywords in your original search terms are present inside a file, as indicated if a green check mark is next to it.
Note: It is not possible to preview the content of a zip file.
After previewing the results, if you decide this is what you are looking for, to access the full information to to download, cite or share a dataset click More Details/Go to source.
Advanced Search
You can perform an advanced search query by using syntax for different ways to search for data such as searching within fields and using Boolean search terms. For more information about syntax for an advanced search, simply click Advanced search help beneath the search field and then click What are the syntax criteria for an advanced search (Field codes and Boolean)? This will reference the FAQ associated with this topic that will help you complete the advanced search.To begin, go to Mendeley Data and click Sign In in the top right section of the page. Upon logging in as an administrator, the My Data page appears. Click the Admin tab. The admin page opens on a Users tab.
How do I manage my institution’s users as an administrator?
From the Users tab you can see a list of users. Also, you will see two sub-tabs – Admin and Data Monitor. These sub-tabs distinguish the different roles that users have within the system. A user’s name may appear on more than one of these sub-lists, indicating that they have multiple roles and privileges assigned to them.To add a user, click the appropriate sub-tab (Admin or Data Monitor) and then click + Add. A dialogue box opens, prompting you to add a User email and then click Add.
To remove a user, click Remove next to their name. A dialogue box opens, asking you to confirm the deletion. Click Remove to confirm.
Upon signing into data.mendeley.com, the My Data page opens by default. For librarians who wish to monitor their institution’s datasets, click the Data Monitor tab at the top of the page. A list of datasets displays.
Is it possible to search with a DOI and find relevant data?
Users can search for a specific dataset by typing the precise DOI in the search box above the dataset list and by clicking the magnifying glass icon.How do I filter what datasets appear?
To filter the list of results, use the filters in the left panel. You can filter by Publication Date, Added Date, Repositories or Data Types. You also can filter using a specific date range in by clicking the calendar icons to enter From and Until dates. Or, you may choose to select one of the radio buttons to filter by Anytime, Last 3 months, or Last 12 months.To filter by Repository or Data Type enter search words in each of the filter’s respective text fields or select one or more checkboxes from each of the filter’s respective lists. You are also able to make multiple selections for each.
At the top of the left panel is the Institutional datasets drop-down menu. This allows you to make a selection to filter by the following:
- All datasets (default setting) – this list shows all of your institution’s datasets.
- Automatically excluded datasets – this list shows…
- Manually excluded datasets –Once completely processed, this list shows all datasets that have been manually excluded using the Exclude feature in Data Monitor.
- Pending additions – this list shows all datasets that were added using the Add feature in Data Monitor and are being processed.
- Pending exclusions - this list shows all datasets that were excluded using the Exclude feature in Data Monitor and are being processed.
What other actions can I take with Data Monitor?
Once you have entered filters to generate the datasets you want to monitor, you can click the dataset title to view metadata including the description, the repository where it is located, contributors, the date it was published, the Dataset DOI/PID, and the types of data contained within it. To view the actual dataset, click the View dataset button or, if applicable, click the View article button to view the article.How do I add datasets to my institution?If you find it necessary to add datasets to your institution, from the menu at the top of the right panel, click Add. The Add datasets dialogue box opens, prompting you to add a dataset by copying the DOI or persistent identifier into the field, or by searching the Data Monitor corpus. Refer to Which data repositories are indexed in Data Monitor? to learn more about our dataset corpus.
Once a list of search results appears, click the + Add dataset button for the dataset(s) you wish to add. If you need to do an advanced search, please refer to help article How do I search for data, including advanced search options? and go to the section labeled Advanced Search. When you are finished adding the datasets you want, click the ‘x’ at the top right of the box to close it. The newly added dataset will appear on the list of Pending additions, found in the Institutional datasets drop-down menu and will show up in your institution’s dataset list as well as the showcase page in approximately twenty-four (24) hours.
Note: Only librarians with access to Data Monitor can add datasets, and only to their own institution.How do I exclude datasets from my institution?If necessary to exclude datasets from your institution you must first select what you want to exclude. From the list of results on the right panel, check one or more checkboxes next to the desired dataset. From the menu at the top of the right panel, click Exclude. The Exclude datasets dialogue box opens, prompting you to confirm that you want to exclude the dataset(s). Click the Exclude button to confirm. The excluded dataset will appear on the list of Pending exclusions, found in the Institutional datasets drop-down menu and will be removed from your institution’s dataset list as well as the showcase page in approximately twenty-four (24) hours. Once the exclusion is completely processed, it will appear on the list of Manually excluded datasets, found in the Institutional datasets drop-down menu.
Note: We do our best to represent the original datasets in the Data Monitor corpus. In some cases, when a dataset contains institutional affiliation information in its original metadata, this affiliation cannot be corrected in Data Monitor. If you think you found a potential error, we advise that you first check the original dataset and if corrections are needed submit your request to the repository where the dataset is hosted.How do I export datasets?You may export all datasets listed in your institution’s Data Monitor page by clicking Export All and then selecting the preferred format (Data as CSV or Data as XLSX) from the dropdown menu that appears. To export a list of selected datasets you must first select what you want to export. From the list of results on the right panel, check one or more checkboxes next to the desired dataset. Then click the Export Selected dropdown menu and then select your preferred file format. Save the file to a location of your choice as you normally would. This is helpful in allowing you to analyze the information about the datasets you exported.
Note: We do our best to represent the original datasets in the Data Monitor corpus. In some cases, when a dataset contains institutional affiliation information in its original metadata, this affiliation cannot be corrected in Data Monitor. If you think you found a potential error, we advise that you first check the original dataset and if corrections are needed submit your request to the repository where the dataset is hosted.
How do I export datasets?You may export all datasets listed in your institution’s Data Monitor page by clicking Export All and then selecting the preferred format (Data as CSV or Data as XLSX) from the dropdown menu that appears. To export a list of selected datasets you must first select what you want to export. From the list of results on the right panel, check one or more checkboxes next to the desired dataset. Then click the Export Selected dropdown menu and then select your preferred file format. Save the file to a location of your choice as you normally would. This is helpful in allowing you to analyze the information about the datasets you exported.
Digital Commons Data
Digital Commons Data is a module for research data submission and hosting, part of the Digital Commons repository suite. Digital Commons Data offers a secure and trusted hosted platform for researchers to collaborate and manage data-intensive projects, and to share datasets in accordance with the FAIR data principles and funder policies.
How is Digital Commons Data different from Mendeley Data?
While Digital Commons Data is offered to researchers at subscribing institutions under their institutional (data) repository, Mendeley Data is the Elsevier open generalist data repository to create, share and access FAIR data globally provided free to journal authors and researchers who may not have access to institutional or domain-specific repositories.In order to access your institution's repository you must have access to Digital Commons Data via your institution. This can be either by:
- Logging in via institutional authentication (e.g. Shibboleth). This is the preferred method of access, to ensure reliable access to institutional features.
- Accessing from your institution's IP range
- Logging in with an institutional email address
Datasets are required to have a title, description, and at least one named contributor. Datasets must be scientific in nature and consist of research data. For example, raw or processed experimental or observational data is acceptable, rather than the narrative research article which may have resulted from the research. Datasets must NOT have already been published, and therefore may not already possess a DOI. They must NOT contain:
- Executable files or archives that are not accompanied by individually detailed file descriptions
- Copyrighted content (audio, video, image, etc) to which you do not own the copyright
- Sensitive information (for example, but not limited to, patient details, dates of birth, etc.)
What are the maximum size and types of files that can be uploaded to Digital Commons Data?
If your Institution subscribes to Digital Commons Data you will have the ability to create datasets up to a maximum size of 100GB. The maximum size will depend on the storage agreement that your institution has. To benefit from the additional size limit as an institutional user, you will need to connect your Mendeley account with your institutional email address. You can upload files of any format including individual files, zipped files and folders.Note: Zipped files preview is not supported.
Once a dataset is drafted, it is in what is referred to as a draft state, meaning it has not yet been published. While in this state datasets can be edited and deleted. However, once a dataset it published, it is not possible to edit or delete it. For example, when you draft a dataset but do not publish it, it appears in My Data under the tab Datasets and has a status of Draft in the Published Version column.
If you publish a dataset and need to modify it, you will do so by using a new version of it. Once you begin editing the dataset, for instance to change any of the metadata, or to add or remove files, you are actually editing the next version which is a replication of the original one.
For example, your published dataset appears in My Data and has a status of Version 1 in the Published Version column. If you click Edit draft, the dataset opens, allowing you to make changes. However, you will see in the right panel under the Published information section that the Status field shows Draft (Version 2), the Published version field shows Version 1, and the Visibility field is Private.
This new version is visible only to yourself and anyone you invite as a collaborator or with whom you share the link. This new version will also be in the draft state until it is ultimately published. If you start to edit the dataset again after it is again published, you will be editing the next iteration - Draft (Version 3), for example. All published versions of a dataset can be viewed and compared by clicking the links in the Version history.
When publishing data with your institution’s Digital Commons Data repository, there is a range of Creative Commons and open software and hardware licences from which to choose. Digital Commons (and parent company Elsevier) do not own the data you upload and publish using the your institutional repository. Your institution retains control and copyright over the data and can guide you on which terms to choose under so that others may consume and reuse your data. Draft datasets can be deleted in the web interface or API and your published datasets can be deleted by contacting your institutional repository manager (e.g. your institution’s Librarian).
Depositing your research data, code or other research objects in a repository enables you to share your results privately with collaborators or peer reviewers. Sharing your data or code publicly supports research reproducibility, supports you with receiving credit for your work through citations and others with reuse.
Your publicly available published dataset will receive a DOI (Digital Object Identifier) and you may decide to share it fully, restrict access to the underlying files and share metadata of your dataset, or you may set an embargo date to release your dataset publicly in case your results are under peer-review as part of scholarly article.
To learn more about creating datasets, refer to help article, How do I draft and edit a dataset?
Yes, as an institutional user you can. Metadata is useful because datasets can be described in more detail and more consistently according to a standard template. This helps the institution with organizing data, and researchers with discovering and interpreting data. Your institution can set a custom metadata template with fields for all datasets. Every author at your institution will be presented with the additional fields on their dataset. The following custom metadata fields are currently supported:
- Free text
- List of options (Single-select)
- List of options (Multi-select)
- Date
To ensure the highest level of integrity and security possible, data is stored on Amazon’s S3 servers in Ireland. Our service was extensively penetration tested and received certification. Additionally, your published datasets are archived with Data Archiving and Network Services (DANS) to preserve your data over the long term. DANS is a long-term archiving provider, which is an institute of the Dutch Academy KNAW, and of the Netherlands' national research council, NWO. We contract with DANS to archive all valid published datasets in perpetuity. The agreement ensures that the DOIs we provide for datasets will always resolve to a web page, where the dataset metadata and files will be available. Data archived at DANS is backed up and stored in three locations for redundancy.
Yes, we can integrate with your institution's local storage servers, thus enabling users to deposit files to, and retrieve them from, your storage via your institutional repository. This means that all data file uploads and downloads go to and from your storage and allows your institution to retain full control of your data.
Yes, the following S3-compatible providers are supported:
- Minio
- Wasabi
- DigitalOcean Spaces
- Dreamhost
- MERG
Yes, as a Digital Commons Data customer you can choose an alternative AWS region. For more information about AWS available regions, refer to the related Amazon link if you wish your data to remain in a particular jurisdiction.
Yes, you can use Digital Commons Data's repository and management interfaces but choose to use your own AWS storage.
Yes, you can opt for local storage to hold data files. Additionally, file transfers are routed through, but not stored on, Digital Commons Data servers in AWS eu-west-1 region located in Ireland. However, dataset metadata are stored in that same AWS region, and published data files held on institutional storage are indexed in Data Monitor for full discoverability via the search engine.
When an author associated to your institution (or delegated customer moderator) submits a dataset for publishing it appears in your customer moderation queue. To view your moderation queue navigate to the header of the institutional repository page and click the tab Moderation. This will allow you to view the dataset metadata, download the files, and decide what you wish to do next. All datasets submitted for publishing, whose author is associated to your institution, will appear in your queue for moderation.
How does a moderator review a dataset before it becomes publicly available?
Moderators can decide to approve a dataset in their queue to go live, return it to the author with comments to request changes, or directly edit the dataset title or description. Moderation enables data curators and librarians to curate and maintain the quality of dataset outputs associated to the institution. For more details please refer to How do I moderate my Institution’s datasets?When publishing a dataset, a user may choose to defer the date at which the data becomes available (for example, so that it is available at the same time as an associated article). This means that the description and files of that dataset are not publicly available until the embargo date is reached. Meanwhile, other information about the dataset, such as the contributors, title, citation and associated articles, becomes available immediately prior to the embargo.
Yes! Once you publish your data it is given a digital object identifier (DOI) number, making it a citable reference.
To link an existing dataset with a published article please contact your institution’s Librarian. In case your dataset was made available to reviewers during peer review of article we may be able to add an associated article badge to your dataset.
To link a draft dataset to a published article refer to How do I draft and edit a dataset?
The Framework for Scholarly Link Exchange, known as Scholix, is an initiative to create an open global information ecosystem to collect and exchange links between research data and literature. Digital Commons Data contributes to Scholix by sending its metadata, including links to associated articles, to DataCite, one of Scholix’s hubs that aggregates information on the links between datasets and articles. This enables broad visibility and findability of these links by anyone.
Digital Commons Data supports harvesting our entire repository of public dataset records using the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH) standard. This means metadata for all datasets published in your institutional repository are available in an open format to facilitate large-scale acquisition and analysis of records, underscoring our commitment to open science.
Each dataset in your institution’s repository displays a basket of different usage metrics to help measuring the impact of research data.
Reuse metrics
These metrics include downloads, views and data citations. Downloads and views exclude machine-driven usage (e.g. bots, crawlers which are filtered according to the Project COUNTER list of bots). Data citations are sourced from DataCite and Crossref via the DataCite Event Data service.Altmetrics
We display metrics capturing social media attention, media & policy mentions powered by PlumX.Any of your content can be accessed and managed via our API. Please visit API documentation by navigating to the bottom of the page and clicking the API tab on in the footer.
Projects are an active research data collaboration tool which enables research groups to gather, organize, annotate, and share data all in one place. Projects allow you to collect your research data as it is generated, easily share it privately with your group, and organize and label it for easy retrieval and packaging. It also helps you get more value from the data you generate by enabling you to share better quality data to increase the likelihood of your data being used and cited.
To create a Project space navigate to the top of the page and on the header click the tab Projects. You can invite other researchers to join you or access any project you have previously been invited to. Once you are working on a project, you can connect a range of data sources, upload data to draft datasets, collaborate with your team on datasets, and eventually publish your data.
If your data files are held on a storage service such as Dropbox, Google Drive, Box or Azure, you can connect the folders where they are held, to any of your projects. Then as new files are added, they will become available to your project team to view, share, and add to datasets. If your team uses a storage service we do not currently connect to, let us know so we can investigate supporting it. For detailed information on managing your projects refer to How do I create a project?
Digital Commons Data dataset-article links can be added or removed (including existing links) by your institution’s data repository Admin. The attribution of the dataset to your institution is not affected by this action. To learn more about the Admin function and linking articles to datasets refer to section How do I manage my institution’s datasets as an administrator? in the help article How do I perform Administrative functions for Digital Commons Data?.
Firstly log in to your institution’s repository by navigating the to the top right of your institutional repository’s homepage and click the tab Sign In. The welcome page My Data then appears.
What are the options for initially drafting a dataset?
Option A: If you are logged in, also from your institution's repository homepage, you can click My Data, and then click the leftmost “plus” button labeled Create new dataset under the Find research data section.Option B: Click Projects and then, from the list of displayed projects, click on a project. Then, in Shared draft datasets click Create a dataset or Import from your datasets. Enter the dataset name and then click Save.
How do I add or remove contributors?
To add contributors, click the '+' in the Contributors section beneath the Title field. Then enter the email address and first and last name (required), and optionally, you may also include the Institution, ORCID iD, and details about the individual’s contribution. Finally, click Save Contributor. To remove a contributor, click on the individual’s name and then click Remove Contributor.Note: By default, your name appears as a contributor since you created the dataset. However, you may remove yourself ONLY after at least one other contributor is added to the dataset.
How do I add metadata to my newly drafted dataset?
Once you have taken the preliminary step to create a dataset, you then must enter pertinent metadata. From the top of the new dataset page, you can edit the title.Enter a description into the Description field.
To add data into the My files field of the dataset navigate to the section Drag files or folders here and drop off your files in that area or click Click here to upload. The latter prompts you to either upload a file from your computer by navigating to, selecting a file, and clicking Open from the Windows explorer window. Once the file upload is complete it will appear in the My files field. You can add a file or an entire folder, including zip files. For more information about file size limits refer to the section What are the maximum size and types of files that can be uploaded to Digital Commons Data? in FAQ What are the requirements for datasets?
At this point you have the option to decide whether your dataset should be made fully accessible, including underlying files and folders, or restricted. To publish only the metadata of your dataset click the checkbox preceding Restrict access to files. Dataset users that would like to access your files will be able to request access and you can decide when to share files with specific requesters.
The Institution field is optional and automatically populates your institution by default. However, you may add other institutions if needed. To do so, enter an institution name.
You are required to add at least one category in the Category field before you publish a dataset. To do so, start typing in the Category field and then you can select from the list that populates as you type. You are not able to add a custom category so choose one that is closest to describing the category you need.
Note: At this point, after having added data, you have effectively drafted your dataset and it is automatically saved into the system. If necessary, you can stop at this point and return to it later to edit or delete it. Refer to the help article How do I edit or delete a draft dataset?. Otherwise, you can continue completing the information.
Optionally, you may add details about how to reproduce the research represented in your dataset by entering these steps in the Steps to reproduce field.
You can also add additional metadata by adding details in the Date the data was collected and Nature of the data fields, respectively.
The License field defaults to ‘CC BY 4.0’ but you can change that by clicking Change and making a selection from the drop-down menu, and then clicking Change License. The All tab is displayed by default, but you can further specify the license type to be changed by selecting the Data,Software, or Hardware tab and then selecting the license type and clicking Change License.
If appropriate you can also add a Related link to your dataset by clicking the Add a related link button at the bottom of the page. A dialogue box opens, prompting you to indicate a link type by selecting the Article, Dataset, or Software radio button, entering a URL link, and making a selection from the Relationship drop-down menu. You will then click Add link. The newly added link appears in the Related Links field near the bottom of the page of your published dataset.
How do I preview a newly drafted dataset?
Once you have entered all the information into your newly created dataset, you may want to see how it will appear. To do so, click Preview at the bottom of the page, which will display how it will look once it is published.What if I want to defer the availability of data to a later date (place a dataset 'under embargo')?
When drafting a dataset, a user may choose to defer the date at which the data becomes available to ensure it is only available at the same time as an associated article, meaning the dataset description and files are not publicly available until that date.To place a dataset under embargo, it must be in the draft state. Click Set Embargo Date at the bottom right area of the page. The Set Embargo Date dialogue box opens, prompting you to indicate the time length of the embargo by either selecting 3 months, 6 months, or 1 year; or by setting a date using the calendar feature. Once a selection is made, click Set Embargo.
You can edit or delete a dataset only while it is in the Draft state, meaning until the point that you publish it. To do so, you must first locate it. Refer to FAQ What is the difference between a “draft” dataset and a “published” dataset?
After logging into your institution’s repository, click the My Data tab. You will see a list of datasets. Only datasets that are labeled Draft in the State column can be edited or deleted.
How do I edit a draft dataset?
To edit a draft dataset, click the dataset Name to open it and you will now be able to make edits. For more detailed information about the differences between editing draft and published datasets, please refer to FAQ What is the difference between a “draft” dataset and a “published” dataset?.How do I delete a draft dataset?
To delete a /draft dataset, open the dataset draft as described above. Then click Delete (preceded by trashcan icon). A dialogue box appears, asking you to confirm that you want to delete the dataset. If so, click Delete. If you decide not to delete the dataset, click Cancel or close the dialogue box by clicking the ‘x’ in the top right corner.How do I delete a published dataset?
To delete a published dataset please contact your repository administrator.Once you have drafted a dataset and added all the pertinent information, you can publish it by clicking Publish at the bottom right section of the page. Notice that beneath the Publish button, you will see an indication of the version you are about to publish. Once you click Publish you will be prompted to check several boxes indicating that you understand and agree to the conditions under which the dataset will be published. To publish metadata only records you will need to click the “Restrict access to files” check box in your draft dataset before publishing it. For more information refer to How do I draft and edit a dataset?
Note: Any visitor to a dataset page can preview files in a published dataset without having to download the files. This only applies to publicly available files in that dataset.
Folders are a way to group and logically organize the files in your dataset, in the same way that you would organize the files on your computer. You can add a maximum of 200 folders.
How do I add a folder?
From within the dataset, click New Folder by the My files field. A new folder will appear inside it.Next, to add a name, to the New folder click the 3 dots icon in the same row and subsequently click Rename. In the dialogue box write the preferred name. To add a description, again, click the 3 dots icon in the same row and click Description. A dialogue box emerges allowing you to edit a description of the folder of up to 3000 characters.
How do I create sub-folders?
To quickly create a sub-folder simply click on an existing folder and then click New Folder. A new sub-folder will be created within the selected folder.Note: You can create sub-folders up to 8 folders deep. You can also move a folder into another folder to make it a sub-folder. You cannot reorder folders, as these will always be sorted alphabetically/numerically.
If you need to move one or more folders into another one, then check the box next to each of the folders you wish to move, and then click Move. A dialogue box opens prompting you to select the folder you want to move the folders into. Next, click Move here. These will now be sub-folders inside the folder into which you moved them.
How do I delete a folder?
To delete a folder, simply check the box next to the desired folder and then click Delete. You will not be asked to confirm the deletion so be sure this is what you want to do.Similar to adding files and folders to a dataset, you can add files or entire folders directly into an existing folder in your dataset.
What are the options for adding content?
Option A: To add content directly into a folder, click on the folder to select it and then. once in it, drag the files onto the drop zone in the My files section, or click Click here to upload depending on your browser. The file will be placed directly inside the folder without the need to move it.Option B: After creating a folder, you can move content (files and folders) that are listed in the My files section into it. Check the box next to the item(s) you wish to move and then click Move. A dialogue box opens prompting you to select the folder you want to move the content into. Next, click Move here. These will now be placed inside the folder into which you moved them.
Note: You can add a zip file. However, its contents cannot be previewed. So, you will have to download the zip file to view its contents. You can also add nested folders, branching up to 14 levels deep, from the default root folder.
Upon signing into your institution’s repository, click the Projects tab. The Projects page displays a list of all existing projects for which you are either the owner or have been invited to join by another owner. This is the point from which you will add a new project.
From the Projects page, click + New Project. The New Project dialogue box opens, prompting you to enter a Project title and Description for the new project. Then, click Create project.
Now that you have created the project, you can connect a range of data sources, upload data to draft datasets, collaborate with your team on datasets, and eventually publish your data.
How do I add members and data to a project?
You may first want to add collaborators to your project. To do so, click the Members icon in the top right corner. The Manage project members dialogue box opens, prompting you to search for members by their email address. Click Search. A list of names will appear. Click + Add next to the name you want to add. Now, you must assign a project role to this person as follows:- An owner can edit and delete projects.
- A project administrator can do different things, like assign owners and members.
- An editor can edit the project and any datasets within it.
- A viewer can only view the project but cannot change anything about it.
Note: If an individual you wish to add is not already a registered Mendeley user, when you click Search you will get a notification from the system, Users not found, upon which you will then be prompted to send an invitation via email for the person to create an account and then subsequently join your project. Click Send email invite to initiate this procedure.
How do I edit a project’s metadata?
From the Projects page, click Settings (gear icon) in the top right corner and select Edit metadata. The Edit Project window opens, allowing you to edit the Project title or Project description. Once you have finished your edits, click Save Changes.How do I manage data in my project?
From within your project there are three main sections on the page:- Data sources – allows you to add a folder from an external cloud storage data source, such as Dropbox, Box, Google Drive, and One Drive, in order to share files with your team.
- Shared draft datasets – allows you to create a dataset to share date with your project team.
- Published data – allows you to view published datasets in your project.
How do I add data sources?To add data sources, from inside the Data sources section, click Add a data source. The Select a data source dialogue box opens, allowing you to select the data source from which you want to add a folder. In the Add from an existing Data Source section click on the preferred source icon (for example Google Drive), and then click Select.
Note: If your data source is not already connected to Digital Commons Data, you can add it by clicking an applicable icon from the Create new data source section in the Select a data source window. Follow the on-screen instructions and read the notices associated with connecting your external account.
Once you select the data source from which you want to share a folder, the Select folders to add to project window opens, prompting you to select the folder you want to share and then click Share Folders. The folders you selected will appear in the Data sources section in your project.
Note: You can only share folders, not individual files. Therefore, you would need to first share a folder and then look in it to locate and download a particular file. You may also drill down into a folder to share sub-folders inside of it.
The folders you add to the Data sources section in your project that are from a cloud storage data source automatically synch with Digital Commons Data. So, if you go to your Google Drive and for example, make edits to folders or delete sub-folders, the actions you perform there will replicate identically inside your folder structure in the Data sources section of your project.
To easily add content from within the folders in your project into a dataset in your project, clicking on a folder and navigate to the contents inside it or in a sub-folder within it. Once you locate the file you wish to add to a dataset, simply drag it into the dataset in the Shared draft datasets section and click Copy. A copy of the file will be added to the root of the dataset.
Note: Any updates made to the original source file will NOT synch with a copy that you dragged into the dataset.How do I share datasets?To share datasets, from inside the Shared draft Datasets section, click + Add a shared dataset. A box opens, prompting you to add a Dataset name and click Save.
Once the dataset is added, you can click on it and a side panel opens, prompting you to Edit or Remove the dataset. Click Edit to begin. Refer to Help article, “How do I draft and edit a dataset?” and go to the section labeled “How do I add information to my newly drafted dataset?” for more details about how to add data files or edit fields in a dataset. Repeat the above steps to add additional datasets to your project.How do I publish shared datasets from within my project?Once you have added datasets to the project, you can publish them from within the project. From inside the Shared draft datasets section, click on the dataset you wish to publish. In the right panel, scroll down and click Edit to open the dataset. Once you have verified that all the information is correct, and/or you have made any final edits, click Publish. Refer to Help article How do I publish a draft dataset? for more information. Once you publish the dataset it will appear in the Published data section of your project.How do I add contents from folders into a shared dataset in my project?Once you have added folders and datasets to your project, you can easily add content from within the folders to datasets, by using one of the following options:
Option A: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Next, you can download the files onto your computer. Now, from the Shared draft datasets section, click the dataset to which you want to add files. Click Edit to open the dataset. Refer to Help article, “How do I draft and edit a dataset?” and go to the section labeled “How do I add information to my newly drafted dataset?” for instructions on how to add data into the My files field.
Option B: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Once you locate the file you wish to add to a dataset, simply drag it into the dataset in the Shared data datasets section and click Copy. A copy of the file will be added to the root of the dataset.
Note: Any updates made to the original source file will NOT synch with a copy that you dragged into the dataset.
Once the dataset is added, you can click on it and a side panel opens, prompting you to Edit or Remove the dataset. Click Edit to begin. Refer to Help article, “How do I draft and edit a dataset?” and go to the section labeled “How do I add information to my newly drafted dataset?” for more details about how to add data files or edit fields in a dataset. Repeat the above steps to add additional datasets to your project.
How do I publish shared datasets from within my project?Once you have added datasets to the project, you can publish them from within the project. From inside the Shared draft datasets section, click on the dataset you wish to publish. In the right panel, scroll down and click Edit to open the dataset. Once you have verified that all the information is correct, and/or you have made any final edits, click Publish. Refer to Help article How do I publish a draft dataset? for more information. Once you publish the dataset it will appear in the Published data section of your project.How do I add contents from folders into a shared dataset in my project?Once you have added folders and datasets to your project, you can easily add content from within the folders to datasets, by using one of the following options:
Option A: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Next, you can download the files onto your computer. Now, from the Shared draft datasets section, click the dataset to which you want to add files. Click Edit to open the dataset. Refer to Help article, “How do I draft and edit a dataset?” and go to the section labeled “How do I add information to my newly drafted dataset?” for instructions on how to add data into the My files field.
Option B: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Once you locate the file you wish to add to a dataset, simply drag it into the dataset in the Shared data datasets section and click Copy. A copy of the file will be added to the root of the dataset.
Note: Any updates made to the original source file will NOT synch with a copy that you dragged into the dataset.
Option A: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Next, you can download the files onto your computer. Now, from the Shared draft datasets section, click the dataset to which you want to add files. Click Edit to open the dataset. Refer to Help article, “How do I draft and edit a dataset?” and go to the section labeled “How do I add information to my newly drafted dataset?” for instructions on how to add data into the My files field.
Option B: Click on a folder and navigate to the contents inside it or in a sub-folder within it. Once you locate the file you wish to add to a dataset, simply drag it into the dataset in the Shared data datasets section and click Copy. A copy of the file will be added to the root of the dataset.
Note: Any updates made to the original source file will NOT synch with a copy that you dragged into the dataset.
To edit or delete a project you must have the role of owner or admin of the project. While logged in, go to Projects and search for the project you want to edit or delete.
To make edits, click the project. Refer to Help article How do I create a project? for instructions on inviting more members, editing metadata, or adding more data sources and data folders to the project.
You will only see the Delete button available if you are the project owner. If the button is available click Delete. A dialogue box opens, asking you to confirm the deletion, as it cannot be undone. Click Delete to confirm.
Note: Any of datasets that were linked to the project you deleted will still be available in the respective My Data section of the person to whom it belongs.
To begin, Sign In to your institution’s Digital Commons Data instance at the top right section of the page. Upon logging in as an administrator, the My Data homepage appears. Click the Admin tab. The admin page opens on the Datasets tab by default. You will see four sub-tabs in the upper right area – Datasets, Users, Audit Log, and Customise Homepage.
How do I manage my institution’s datasets as an administrator?
The Datasets tab lists your institution’s published datasets. There are sub-tabs for both Public and Draft datasets. To filter the list of datasets, enter search words in the Search field and click the “magnifying glass” icon or press Enter.How do I manage public datasets?From the Public datasets sub-tab, displayed are the Name of the dataset, the Owner, Version, Published date and time, and the DOI. By clicking on the three dot icon you also have the ability to Manage articles associated with a dataset or to Remove a dataset. Refer to FAQ What is the difference between a “draft” dataset and a “published” dataset? for more information about dataset versions.
To view the dataset page, click the DOI link to open it, thus enabling you to view more detailed information, download files, cite the dataset and compare versions of it.
If you wish to export the metadata of your institution’s datasets you may do so by clicking on Export CSV which is found above the list of datasets in the Public datasets sub-tab.
To manage articles associated with the dataset, click Manage articles. The Manage articles window opens, allowing you to add an article DOI. To do so, enter the DOI in the Add article DOI field and then click + Add.
Once an article is added, it can also be removed. Click Manage articles. The Manage articles window opens, allowing you to locate the Associated article you wish to remove and click Delete.How do I manage draft datasets? From the Draft datasets sub-tab, displayed are the Name of the dataset, the Owner, Created date and time, and the Last Updated date and time. You also have the ability to Edit datasets or to Transfer ownership of a dataset. Refer to Help article How do I draft and edit a dataset? and go to the section labeled How do I add information to my newly drafted dataset? for further instructions.How do I manage my institution’s users log as an administrator?
From the Admin page, click the Users tab to see a list of users. Also, from the Users tab, you may see a combination of the three sub-tabs – Admin, Moderator, and Data Monitor. These sub-tabs distinguish the different roles that users may have within the system and depending on your institution's subscription of Digital Commons Data. Note that a user’s name may appear on more than one of these sub-lists, indicating that they have multiple roles and privileges assigned to them.
To add a user, click the appropriate sub-tab (Admin, Moderator, or Data Monitor) and then click + Add. A dialogue box opens, prompting you to add a User email and then click Add.
To remove a user, click Remove next to their name. A dialogue box opens, asking you to confirm the deletion. Click Remove to confirm.How do I manage my institution’s audit log as an administrator?
From the Admin page, click the Audit Log tab to see a list of all of your institution’s dataset editing activity in chronological order. You can see the Dataset ID, Version, which Action occurred (such as created or updated), which Entity was updated (such as license or draft dataset), which User ID made the edit, and the Date (including time) the edit was made. You also have the ability to click Expand details to see more information and download the record of Action details.
You can further filter dataset editing activity by using the filters in the left panel. To view editing activity for a specific date range, click the calendar icons to enter From and Until dates. Or, you may choose to select one of the radio buttons to filter by Anytime, Last 24 hours, Last week, or Last month.
Additional filters include User ID, Dataset ID, and Action type. Each has a text field for you to enter search words.
You may also choose to select one of the radio buttons to filter by All users or Admin only.
Once you have filtered the datasets for which you want to audit editing activity, you can save a list of the results. To do so, click Export results and save the file to a location of your choice as you normally would.How do I customise my institution’s homepage as an administrator?
From the Admin page, click the Customise homepage tab. Here you will see a section at the top called Featured Collections comprised of various topical sections on your institution’s homepage.
The main body of the page displays the contents of the Featured sections. These sections appear as separate areas on your institution’s homepage. Each section has within it a list of collections which include the Collection name, Owner, and Last updated date.How do I manage a featured / topical section on my institution’s homepage?You can determine whether or not to display a particular section by clicking the toggle button to make it either Hidden or Public. You can also determine how a section is displayed by making a selection from the Display drop-down menu to have it appear either as a Card or Title. To allocate a position on the homepage, select a number from the Position drop-down menu.
To add a featured section to your institution’s homepage, click New featured section. The Create featured section dialogue box opens, prompting you to add a Section title and click Create. The newly added section will display, and you can now add collections to it.
To add collections to a featured section, go to the featured section to which you want to make an addition, and click Add collection. The Collections to be added dialogue box opens, prompting you to Find research data. Refer to help article How do I create a collection? and go to the section labeled How do I add a dataset to a collection? for instructions.
To edit a featured section, click Edit (pencil icon) next to the section name. The Edit [section name] dialogue box opens, prompting you to edit the Section title and click Save.
To delete a featured section, click Delete. A dialogue box opens, asking you to confirm the deletion. Click Delete to confirm.
To delete a collection from within a featured section, click Remove.
Note: A dialogue box asking you to confirm the deletion DOES NOT APPEAR. So, be sure you want to remove the collection beforehand!
How do I manage my institution’s users log as an administrator?
From the Admin page, click the Users tab to see a list of users. Also, from the Users tab, you may see a combination of the three sub-tabs – Admin, Moderator, and Data Monitor. These sub-tabs distinguish the different roles that users may have within the system and depending on your institution's subscription of Digital Commons Data. Note that a user’s name may appear on more than one of these sub-lists, indicating that they have multiple roles and privileges assigned to them.To add a user, click the appropriate sub-tab (Admin, Moderator, or Data Monitor) and then click + Add. A dialogue box opens, prompting you to add a User email and then click Add.
To remove a user, click Remove next to their name. A dialogue box opens, asking you to confirm the deletion. Click Remove to confirm.
How do I manage my institution’s audit log as an administrator?
From the Admin page, click the Audit Log tab to see a list of all of your institution’s dataset editing activity in chronological order. You can see the Dataset ID, Version, which Action occurred (such as created or updated), which Entity was updated (such as license or draft dataset), which User ID made the edit, and the Date (including time) the edit was made. You also have the ability to click Expand details to see more information and download the record of Action details.You can further filter dataset editing activity by using the filters in the left panel. To view editing activity for a specific date range, click the calendar icons to enter From and Until dates. Or, you may choose to select one of the radio buttons to filter by Anytime, Last 24 hours, Last week, or Last month.
Additional filters include User ID, Dataset ID, and Action type. Each has a text field for you to enter search words.
You may also choose to select one of the radio buttons to filter by All users or Admin only.
Once you have filtered the datasets for which you want to audit editing activity, you can save a list of the results. To do so, click Export results and save the file to a location of your choice as you normally would.
How do I customise my institution’s homepage as an administrator?
From the Admin page, click the Customise homepage tab. Here you will see a section at the top called Featured Collections comprised of various topical sections on your institution’s homepage.The main body of the page displays the contents of the Featured sections. These sections appear as separate areas on your institution’s homepage. Each section has within it a list of collections which include the Collection name, Owner, and Last updated date.
How do I manage a featured / topical section on my institution’s homepage?You can determine whether or not to display a particular section by clicking the toggle button to make it either Hidden or Public. You can also determine how a section is displayed by making a selection from the Display drop-down menu to have it appear either as a Card or Title. To allocate a position on the homepage, select a number from the Position drop-down menu.
To add a featured section to your institution’s homepage, click New featured section. The Create featured section dialogue box opens, prompting you to add a Section title and click Create. The newly added section will display, and you can now add collections to it.
To add collections to a featured section, go to the featured section to which you want to make an addition, and click Add collection. The Collections to be added dialogue box opens, prompting you to Find research data. Refer to help article How do I create a collection? and go to the section labeled How do I add a dataset to a collection? for instructions.
To edit a featured section, click Edit (pencil icon) next to the section name. The Edit [section name] dialogue box opens, prompting you to edit the Section title and click Save.
To delete a featured section, click Delete. A dialogue box opens, asking you to confirm the deletion. Click Delete to confirm.
To delete a collection from within a featured section, click Remove.
Note: A dialogue box asking you to confirm the deletion DOES NOT APPEAR. So, be sure you want to remove the collection beforehand!
To begin, Sign In to your institution’s Digital Commons Data instance at the top right section of the page. Upon logging in the My Data page appears. Click the Moderation tab. The Datasets in moderation page displays. You will see two tabs on the page - Waiting for review and Returned to owner.
How do I review a dataset before approval?
From the Waiting for review tab, you will see datasets that were drafted and for which publication was requested and are now awaiting review. Click View Draft next to the dataset you wish to review. A dialogue box appears, prompting you to take one of the following actions: Request changes or Approve.How do I edit the dataset title or description?The moderator may decide to edit the title or description of the dataset on behalf of the author. To do so, click “Request changes” and once in the dialogue box click the Edit dataset title and description button at the top of the box.How do I return a dataset to the author?The moderator may decide to return the dataset to the author for updates. To do so, click Request Changes. The Request changes dialogue box opens, prompting you to enter a reason in the Reason for returning dataset to owner open text field. Click Request changes. The dataset will be returned to the author for further action. The dataset that you returned now appears in the Returned to owner tab.How do I approve the dataset? The moderator may decide to approve the dataset. To do so, click Approve.
Note: When reviewing the dataset, the moderator also has the option to download files associated with it.How can I view a list of all datasets previously returned?
To view a list of datasets that were returned to the author, from the Datasets in moderation page, click the Returned to owner tab. A list of datasets displays. Click View draft to open the dataset and view its information or click Latest request to see the newest comments added when the dataset was returned to the author.How do I view the moderation history of datasets?
From both the Waiting for review and Returned to owner tabs, click Activity next to the dataset for which you would like to see a chronological history. You will see when the dataset was first submitted, when it was subsequently returned, as well as moderator comments that were added each time it was returned.
How do I approve the dataset? The moderator may decide to approve the dataset. To do so, click Approve.
Note: When reviewing the dataset, the moderator also has the option to download files associated with it.How can I view a list of all datasets previously returned?
To view a list of datasets that were returned to the author, from the Datasets in moderation page, click the Returned to owner tab. A list of datasets displays. Click View draft to open the dataset and view its information or click Latest request to see the newest comments added when the dataset was returned to the author.How do I view the moderation history of datasets?
From both the Waiting for review and Returned to owner tabs, click Activity next to the dataset for which you would like to see a chronological history. You will see when the dataset was first submitted, when it was subsequently returned, as well as moderator comments that were added each time it was returned.
After logging to your institution’s Digital Commons Data repository instance, in the My Data click Collections. This is the point from which you can add a new collection. To add a new collection, click the + New Collection button. The New Collection dialogue box opens, prompting you to enter a Name and Description for the new collection. Then, click Create collection.
How do I add a dataset to a collection?
Now you will add items to your collection. Mainly you will add datasets, but you can also add articles or even other collections. To add a dataset, click + Add Dataset. This opens a Add datasets to [collection name] dialogue box, prompting you to enter keywords into the Find research data field.Note: By default, the check box to only show results from your institution is checked. You can uncheck this if you choose to include datasets from sources outside your institution.
From the left panel, you can filter your search results by Data Types, Source Types, and Sources if you opted to deselect the default setting to only show datasets from your institution.
Note: If you need to perform and advanced search, simply click Advanced search help beneath the search field. This will reference the FAQ associated with this topic that will help you complete the advanced search.
Search results appear on the right panel of the window. To view more detailed information and to preview its files, click the title of a dataset. To add the dataset to your collection, click + Add to collection. This selection is now added to your new collection. Click the 'x' at the top right of the window to close it.
How do I edit a collection’s metadata?
You have the option to edit the metadata of your collection. Click Edit Metadata. The Edit Collection information dialogue box opens, allowing you to do the following:- Edit the name
- Add or remove contributors
- Add or remove categories and institutions
- Edit the description
Once you have made your edits, click Save. You may also add additional datasets or delete a dataset by clicking x Remove next to the dataset you want to delete.
How do I publish a collection?
Once you have created the collection, added datasets to it, and made any necessary edits, if you are ready to publish it, simply click Publish. A dialogue box appears, prompting you to confirm that you want to publish the collection. Click Publish to confirm.Your collection now appears as a line item in the search results panel on the Collections page with a status of Published. Collections are also searchable and will appear in Data Monitor as well as on your institution's Digital Commons Data homepage.
Regardless of whether a collection is in the draft state or is published, it is easy to edit, unpublish, or delete it.
How do I edit a collection?
To make edits to a collection, go to Collections in your institution’s instance of Digital Commons Data, locate the collection you want to edit, and then click Edit (pencil icon). This opens the collection and allows you to edit the metadata and add or remove datasets. You can also unpublish it from here if desired. For instructions on editing a collection, refer to Help article How do I create a collection? and go to section How do I edit a collection's metadata?How do I unpublish a collection?
To unpublish a collection, go to Collections, locate the published collection you want to unpublish, and then click Unpublish. This will revert the collection back to Draft status.How do I delete a collection?
To delete a collection, go to Collections, locate the collection you want to delete and complete the following steps accordingly:- If the collection is in Draft status, simply click Delete. You will be asked to confirm the deletion by clicking Delete.
- If the collection is Published, follow the steps to unpublish it, which will revert it to Draft, and then delete as described above.
Mendeley Data
It is not necessary to create a separate Mendeley Data account because your login credentials are valid across Mendeley as a whole.
Datasets are required to have a title, description, and at least one named contributor. Datasets must be scientific in nature and consist of research data. For example, raw or processed experimental or observational data is acceptable, rather than the narrative research article which may have resulted from the research. Datasets must NOT have already been published, and therefore may not already possess a DOI. They must NOT contain:
- Executable files or archives that are not accompanied by individually detailed file descriptions
- Copyrighted content (audio, video, image, etc) to which you do not own the copyright
- Sensitive information (for example, but not limited to, patient details, dates of birth, etc.)
What are the maximum size and types of files that can be uploaded to Mendeley Data?
You can upload files of any format, up to a maximum of 10GB per dataset. The types of files you can upload include individual and zipped files as well as folders. If your Institution has a data repository with Digital Commons refer to What are the requirements for datasets? in the Digital Commons Data FAQ section for more information.Note: Zipped files preview is not supported.
Once a dataset is drafted, it is in what is referred to as a draft state, meaning it has not yet been published. While in this state datasets can be edited and deleted. However, once a dataset it published, it is not possible to edit or delete it. For example, when you draft a dataset but do not publish it, it appears in My Data under the tab Datasets and has a status of Draft in the Published Version column.
If you publish a dataset and need to modify it, you will do so by using a new version of it. Once you begin editing the dataset, for instance to change any of the metadata, or to add or remove files, you are actually editing the next version which is a replication of the original one.
For example, your published dataset appears in My Data and has a status of Version 1 in the Published Version column. If you click Edit draft, the dataset opens, allowing you to make changes. However, you will see in the right panel under the Published information section that the Status field shows Draft (Version 2), the Published version field shows Version 1, and the Visibility field is Private.
This new version is visible only to yourself and anyone you invite as a collaborator or with whom you share the link. This new version will also be in the draft state until it is ultimately published. If you start to edit the dataset again after it is again published, you will be editing the next iteration - Draft (Version 3), for example. All published versions of a dataset can be viewed and compared by clicking the links in the Version history.
DOI stands for digital object identifier and is an alphanumeric code providing a unique and persistent link to specific electronically published content. Mendeley Data assigns a provisional DOI to draft datasets. It is used to make an object uniquely identifiable from any others when your object is published and made available electronically. The DOI for a digital object remains fixed over the lifetime of the object. A permanent DOI for Mendeley Data submitted datasets is issued by DataCite.
When publishing data with our service, there is a range of Creative Commons and open software and hardware licences from which to choose. Mendeley (and parent company Elsevier) do not own the data you upload and publish using the Mendeley Data service. You retain complete control and copyright over the data and choose the terms under which others may consume and reuse it. Draft datasets can be deleted in the web interface or API and your published datasets can be deleted by contacting us. By creating a Mendeley user account and posting data, you grant our service permission to 'publish, extract, reformat, adapt, build upon, index, re-distribute, link to, and otherwise use [published data]'. We only seek to carry out these activities to the extent needed to provide services on our website and in our API for end users, such as enabling public datasets to be discovered and accessed.
Depositing your research data, code or other research objects in a repository enables you to share your results privately with collaborators or peer reviewers. Sharing your data or code publicly supports research reproducibility, supports you with receiving credit for your work through citations and others with reuse.
Your publicly available published dataset will receive a DOI and you may decide to share it fully, restrict access to the underlying files and share metadata of your dataset, or you may set an embargo date to release your dataset publicly in case your results are under peer-review as part of scholarly article.
To learn more about creating datasets, refer to help article, How do I draft and edit a dataset?. To link a draft dataset to a published article refer to How do I associate my data to a published article?
To ensure the highest level of integrity and security possible, data is stored on Amazon’s S3 servers in Ireland. Our service was extensively penetration tested and received certification. Additionally, your published datasets are archived with Data Archiving and Network Services (DANS) to preserve your data over the long term. DANS is a long-term archiving provider, which is an institute of the Dutch Academy KNAW, and of the Netherlands' national research council, NWO. We contract with DANS to archive all valid published datasets in perpetuity. The agreement ensures that the DOIs we provide for datasets will always resolve to a web page, where the dataset metadata and files will be available. Data archived at DANS is backed up and stored in three locations for redundancy.
Yes, datasets posted to Mendeley Data go into a moderation period to verify that requirements are met. Datasets that meet the requirements become publicly visible on the dataset index and are archived with Data Archiving and Network Services (DANS). You may contact our Support team if your dataset remains in moderation for more than a week. Please note that we do not currently validate or curate the contents of valid research datasets. After your dataset has been reviewed, you will receive an email to tell you whether it has been accepted and is publicly visible with an active DOI, or it has been flagged for not complying with the requirements for Mendeley Data datasets. Datasets that do not meet the requirements will not become publicly visible. If you spot a dataset that you think doesn’t meet our requirements, please notify us by clicking the “report” button on the dataset.
We aim to moderate all datasets within 2 business days from submission (excluding UK holidays).
When publishing a dataset, a user may choose to defer the date at which the data becomes available (for example, so that it is available at the same time as an associated article). This means that the description and files of that dataset are not publicly available until the embargo date is reached. Meanwhile, other information about the dataset, such as the contributors, title, citation and associated articles, becomes available immediately prior to the embargo.
Yes! Once you publish your data it is given a digital object identifier (DOI) number, making it a citable reference.
To link an existing dataset with a published article (e.g.https://data.mendeley.com/datasets/v8sfxkh9pw/1) please contact us via our email form by selecting Product Data and with the subject Link dataset and published article.
In case your dataset was made available to reviewers during peer review of article we may be able to add an associated article badge to your dataset. In such cases you will need to seek approval from the journal editor to link a specific version of your dataset to the article it supports.
Upon approval we will be able to place an associated article badge on your dataset with a direct link to the article it supports.
The Framework for Scholarly Link Exchange, known as Scholix, is an initiative to create an open global information ecosystem to collect and exchange links between research data and literature. As a contributor to Scholix, Mendeley Data sends its metadata, including links to associated articles, to DataCite, one of Scholix’s hubs that aggregates information on the links between datasets and articles. This enables broad visibility and findability of these links by anyone.
Mendeley Data supports harvesting our entire repository of public dataset records using the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH) standard. This means metadata for all datasets published in Mendeley Data are available in an open format to facilitate large-scale acquisition and analysis of records, underscoring our commitment to open science.
To measure the impact of research data each dataset in Mendeley Data Repository displays a basket of different usage metrics.
Reuse metrics
These metrics include downloads, views and data citations. Downloads and views exclude machine-driven usage (e.g. bots, crawlers which are filtered according to the Project COUNTER list of bots). Data citations are sourced from DataCite and Crossref via the DataCite Event Data service.Altmetrics
We display metrics capturing social media attention, media & policy mentions powered by PlumX.Any of your content can be accessed and managed via our API by visiting https://data.mendeley.com/api/docs/.
Mendeley Data datasets are moderated to verify that a number of requirements are met. If you find a dataset you consider does not meet these requirements or is in conflict with publication ethics, please notify us via our email form and include “I wish to report a dataset” in the subject line.
To begin, go to data.mendeley.com and click Sign In in the top right section of the page. Upon logging in, you the Mendeley Data homepage appears.
What are the options for initially drafting a dataset?
Option A: From the Mendeley Data homepage, click Create a Dataset. The New Dataset window opens, prompting you to enter a name. Then click Create Dataset.Option B: Alternatively, also from the Mendeley Data homepage, you can click My Data, and then click the New Dataset button in the top left section of the page.
How do I add or remove contributors?
To add contributors, click the '+' in the Contributors section beneath the Title field. Then enter the email address and first and last name (required), and optionally, you may also include the Institution, ORCID iD, and details about the individual’s contribution. Finally, click Save Contributor. To remove a contributor, click on the individual’s name and then click Remove Contributor.Note: By default, your name appears as a contributor since you created the dataset. However, you may remove yourself ONLY after at least one other contributor is added to the dataset.
How do I add metadata to my newly drafted dataset?
Once you have taken the preliminary step to create a dataset, you then must enter pertinent metadata. From the top of the new dataset page, you can edit the title.Enter a description into the Description field.
To add data into the My files field of the dataset navigate to the section Drag files or folders here and drop off your files in that area or click Click here to upload. The latter prompts you to either upload a file from your computer by navigating to, selecting a file, and clicking Open from the Windows explorer window. Once the file upload is complete it will appear in the My files field. You can add a file or an entire folder, including zip files. For more information about file size limits refer to the section What are the maximum size and types of files that can be uploaded to Mendeley Data? in FAQ What are the requirements for datasets?
The Institution field is optional. To populate it, enter an institution name.
You are required to add at least one category in the Category field before you publish a dataset. To do so, start typing in the Category field and then you can select from the list that populates as you type. You are not able to add a custom category so choose one that is closest to describing the category you need.
Note: At this point, after having added data, you have effectively drafted your dataset and it is automatically saved into the system. If necessary, you can stop at this point and return to it later to edit or delete it. Refer to the help article How do I edit or delete a draft dataset?. Otherwise, you can continue completing the information.
Optionally, you may add details about how to reproduce the research represented in your dataset by entering these steps in the Steps to reproduce field.
You can also add additional metadata by adding details in the Date the data was collected and Nature of the data fields, respectively.
The License field defaults to ‘CC BY 4.0’ but you can change that by clicking Change and making a selection from the drop-down menu, and then clicking Change License. The All tab is displayed by default, but you can further specify the license type to be changed by selecting the Data,Software, or Hardware tab and then selecting the license type and clicking Change License.
If appropriate you can also add a Related link to your dataset by clicking the Add a related link button at the bottom of the page. A dialogue box opens, prompting you to indicate a link type by selecting the Article, Dataset, or Software radio button, entering a URL link, and making a selection from the Relationship drop-down menu. You will then click Add link. The newly added link appears in the Related Links field near the bottom of the page of your published dataset.
How do I preview a newly drafted dataset?
Once you have entered all the information into your newly created dataset, you may want to see how it will appear. To do so, click Preview at the bottom of the page, which will display how it will look once it is published.What if I want to defer the availability of data to a later date (place a dataset 'under embargo')?
When drafting a dataset, a user may choose to defer the date at which the data becomes available to ensure it is only available at the same time as an associated article, meaning the dataset description and files are not publicly available until that date.To place a dataset under embargo, it must be in the draft state. Click Set Embargo Date at the bottom right area of the page. The Set Embargo Date dialogue box opens, prompting you to indicate the time length of the embargo by either selecting 3 months, 6 months, or 1 year; or by setting a date using the calendar feature. Once a selection is made, click Set Embargo.
You can edit or delete a dataset only while it is in the Draft state, meaning until the point that you publish it. To do so, you must first locate it. Refer to FAQ What is the difference between a “draft” dataset and a “published” dataset?
After logging into Mendeley Data, click the My Data tab. You will see a list of datasets. Only datasets that are labeled Draft in the State column can be edited or deleted.
How do I edit a draft dataset?
To edit a draft dataset, click the dataset Name to open it and you will now be able to make edits. For more detailed information about the differences between editing draft and published datasets, please refer to FAQ What is the difference between a “draft” dataset and a “published” dataset?.How do I delete a draft dataset?
To delete a /draft dataset, open the dataset draft as described above. Then click Delete (preceded by trashcan icon). A dialogue box appears, asking you to confirm that you want to delete the dataset. If so, click Delete. If you decide not to delete the dataset, click Cancel or close the dialogue box by clicking the ‘x’ in the top right corner.How do I delete a published dataset?
To delete a published dataset, click Delete (trash icon). A dialogue box appears, informing you that it is necessary to contact the support team in order to request the deletion.Once you have drafted a dataset and added all the pertinent information, you can publish it by clicking Publish at the bottom right section of the page. Notice that beneath the Publish button, you will see an indication of the version you are about to publish. Once you click Publish you will be prompted to check several boxes indicating that you understand and agree to the conditions under which the dataset will be published.
Note: Any visitor to a Mendeley Data dataset page can preview files in a published dataset without having to download the files.
Folders are a way to group and logically organize the files in your dataset, in the same way that you would organize the files on your computer. You can add a maximum of 200 folders.
How do I add a folder?
From within the dataset, click New Folder by the My files field. A new folder will appear inside it.Next, to add a name, to the New folder click the 3 dots icon in the same row and subsequently click Rename. In the dialogue box write the preferred name. To add a description, again, click the 3 dots icon in the same row and click Description. A dialogue box emerges allowing you to edit a description of the folder of up to 3000 characters.
How do I create sub-folders?
To quickly create a sub-folder simply click on an existing folder and then click New Folder. A new sub-folder will be created within the selected folder.Note: You can create sub-folders up to 8 folders deep. You can also move a folder into another folder to make it a sub-folder. You cannot reorder folders, as these will always be sorted alphabetically/numerically.
If you need to move one or more folders into another one, then check the box next to each of the folders you wish to move, and then click Move. A dialogue box opens prompting you to select the folder you want to move the folders into. Next, click Move here. These will now be sub-folders inside the folder into which you moved them.
How do I delete a folder?
To delete a folder, simply check the box next to the desired folder and then click Delete. You will not be asked to confirm the deletion so be sure this is what you want to do.Similar to adding files and folders to a dataset, you can add files or entire folders directly into an existing folder in your dataset.
What are the options for adding content?
Option A: To add content directly into a folder, click on the folder to select it and then. once in it, drag the files onto the drop zone in the My files section, or click Click here to upload depending on your browser. The file will be placed directly inside the folder without the need to move it.Option B: After creating a folder, you can move content (files and folders) that are listed in the My files section into it. Check the box next to the item(s) you wish to move and then click Move. A dialogue box opens prompting you to select the folder you want to move the content into. Next, click Move here. These will now be placed inside the folder into which you moved them.
Note: You can add a zip file. However, its contents cannot be previewed. So, you will have to download the zip file to view its contents. You can also add nested folders, branching up to 14 levels deep, from the default root folder.
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To provide you the support you need please consider the below options: